# Copyright 1999-2025 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2

EAPI=8

inherit R-packages

DESCRIPTION='Lipid Annotation for LC-MS/MS DDA or DIA Data'
KEYWORDS="~amd64 ~x64-macos ~arm64-macos"
SRC_URI="http://cran.r-project.org/src/contrib/LipidMS_3.1.0.tar.gz"
LICENSE='GPL-2+'

IUSE="${IUSE-} r_suggests_knitr r_suggests_plotly r_suggests_rmarkdown
	r_suggests_shiny r_suggests_shinyjs r_suggests_shinythemes"
R_SUGGESTS="
	r_suggests_knitr? ( sci-CRAN/knitr )
	r_suggests_plotly? ( sci-CRAN/plotly )
	r_suggests_rmarkdown? ( sci-CRAN/rmarkdown )
	r_suggests_shiny? ( sci-CRAN/shiny )
	r_suggests_shinyjs? ( sci-CRAN/shinyjs )
	r_suggests_shinythemes? ( sci-CRAN/shinythemes )
"
DEPEND="sci-CRAN/iterators
	>=dev-lang/R-4.0
	sci-CRAN/future_apply
	sci-CRAN/patchwork
	sci-CRAN/R_utils
	sci-CRAN/ggplot2
	sci-CRAN/readMzXmlData
	sci-CRAN/future
	sci-CRAN/CHNOSZ
	sci-CRAN/scales
	sci-CRAN/DT
	sci-CRAN/parallelly
"
RDEPEND="${DEPEND-} ${R_SUGGESTS-}"