# automatically generated by g-sorcery
# please do not edit this file

EAPI=8

REALNAME="${PN}"
LITERALNAME="${PN}"
REALVERSION="${PV}"
DIGEST_SOURCES="yes"
PYTHON_COMPAT=( python{3_11,3_12,3_13,3_14} )
DISTUTILS_USE_PEP517=standalone

inherit python-r1 gs-pypi

DESCRIPTION="SigProfilerTopography provides topography analyses for substitutions, dinucleotides and indels for all given samples."

HOMEPAGE="https://github.com/AlexandrovLab/SigProfilerTopography"
LICENSE="UCSD"
SRC_URI="https://files.pythonhosted.org/packages/d8/f6/7c63fba85273855b4a21237759068a6b691b274aab34ddd6c61f32fed680/sigprofilertopography-${REALVERSION}.tar.gz"
SOURCEFILE="sigprofilertopography-${REALVERSION}.tar.gz"
RESTRICT="test"

SLOT="0"
KEYWORDS="~amd64 ~x86"

IUSE=""
DEPENDENCIES="dev-python/SigProfilerMatrixGenerator[${PYTHON_USEDEP}]
	dev-python/SigProfilerSimulator[${PYTHON_USEDEP}]
	dev-python/SigProfilerAssignment[${PYTHON_USEDEP}]
	>=dev-python/xlsxwriter-1.3.7[${PYTHON_USEDEP}]
	>=dev-python/numpy-2.0.0[${PYTHON_USEDEP}]
	>=dev-python/pandas-2.0.0[${PYTHON_USEDEP}]
	>=dev-python/matplotlib-3.4.3[${PYTHON_USEDEP}]
	>=dev-python/scipy-1.1.0[${PYTHON_USEDEP}]
	>=dev-python/statsmodels-0.9.0[${PYTHON_USEDEP}]
	dev-python/fastrand[${PYTHON_USEDEP}]
	>=dev-python/psutil-5.6.3[${PYTHON_USEDEP}]
	dev-python/pyranges[${PYTHON_USEDEP}]
	>=dev-python/intervaltree-3.1.0[${PYTHON_USEDEP}]
	dev-python/pyBigWig[${PYTHON_USEDEP}]"
BDEPEND="${DEPENDENCIES}"
RDEPEND="${DEPENDENCIES}"