# automatically generated by g-sorcery
# please do not edit this file

EAPI=8

REALNAME="${PN}"
LITERALNAME="${PN}"
REALVERSION="${PV}"
DIGEST_SOURCES="yes"
PYTHON_COMPAT=( python{3_11,3_12,3_13,3_14} )
DISTUTILS_USE_PEP517=standalone

inherit python-r1 gs-pypi

DESCRIPTION="cameo - computer aided metabolic engineering & optimization"

HOMEPAGE="http://cameo.bio"
LICENSE="Apache License Version 2.0"
SRC_URI="https://files.pythonhosted.org/packages/source/${REALNAME::1}/${REALNAME}/${REALNAME}-${REALVERSION}.tar.gz"
SOURCEFILE="${REALNAME}-${REALVERSION}.tar.gz"
RESTRICT="test"

SLOT="0"
KEYWORDS="~amd64 ~x86"

IUSE="all bokeh docs jupyter parallel plotly sbml test"
DEPENDENCIES=">=dev-python/numpy-1.9.1[${PYTHON_USEDEP}]
	>=dev-python/scipy-0.14.0[${PYTHON_USEDEP}]
	dev-python/blessings[${PYTHON_USEDEP}]
	>=dev-python/pandas-1.1.3[${PYTHON_USEDEP}]
	>=dev-python/ordered-set-1.2[${PYTHON_USEDEP}]
	dev-python/cobra[${PYTHON_USEDEP}]
	dev-python/future[${PYTHON_USEDEP}]
	dev-python/optlang[${PYTHON_USEDEP}]
	>=dev-python/numexpr-2.4[${PYTHON_USEDEP}]
	>=dev-python/requests-2.10.0[${PYTHON_USEDEP}]
	>=dev-python/networkx-2.4[${PYTHON_USEDEP}]
	dev-python/Escher[${PYTHON_USEDEP}]
	dev-python/IProgress[${PYTHON_USEDEP}]
	dev-python/inspyred[${PYTHON_USEDEP}]
	>=dev-python/lazy-object-proxy-1.2.0[${PYTHON_USEDEP}]
	dev-python/palettable[${PYTHON_USEDEP}]
	dev-python/gnomic[${PYTHON_USEDEP}]
	>=dev-python/openpyxl-2.4.5[${PYTHON_USEDEP}]
	>=dev-python/click-6.7[${PYTHON_USEDEP}]
	all? ( dev-python/bokeh[${PYTHON_USEDEP}] )
	all? ( >=dev-python/ipywidgets-4.1.1[${PYTHON_USEDEP}] )
	all? ( dev-python/pytest-benchmark[${PYTHON_USEDEP}] )
	all? ( >=dev-python/lxml-3.6.0[${PYTHON_USEDEP}] )
	all? ( dev-python/python-libsbml[${PYTHON_USEDEP}] )
	all? ( >=dev-python/redis-2.10.5[${PYTHON_USEDEP}] )
	all? ( >=dev-python/plotly-4.12.0[${PYTHON_USEDEP}] )
	all? ( >=dev-python/jupyter-1.0.0[${PYTHON_USEDEP}] )
	all? ( >=dev-python/numpydoc-0.5[${PYTHON_USEDEP}] )
	all? ( >=dev-python/sphinx-1.3.5[${PYTHON_USEDEP}] )
	all? ( dev-python/pytest-cov[${PYTHON_USEDEP}] )
	all? ( >=dev-python/ipyparallel-5.0.1[${PYTHON_USEDEP}] )
	all? ( dev-python/pytest[${PYTHON_USEDEP}] )
	bokeh? ( dev-python/bokeh[${PYTHON_USEDEP}] )
	docs? ( >=dev-python/sphinx-1.3.5[${PYTHON_USEDEP}] )
	docs? ( >=dev-python/numpydoc-0.5[${PYTHON_USEDEP}] )
	jupyter? ( >=dev-python/jupyter-1.0.0[${PYTHON_USEDEP}] )
	jupyter? ( >=dev-python/ipywidgets-4.1.1[${PYTHON_USEDEP}] )
	parallel? ( >=dev-python/redis-2.10.5[${PYTHON_USEDEP}] )
	parallel? ( >=dev-python/ipyparallel-5.0.1[${PYTHON_USEDEP}] )
	plotly? ( >=dev-python/plotly-4.12.0[${PYTHON_USEDEP}] )
	sbml? ( dev-python/python-libsbml[${PYTHON_USEDEP}] )
	sbml? ( >=dev-python/lxml-3.6.0[${PYTHON_USEDEP}] )
	test? ( dev-python/pytest[${PYTHON_USEDEP}] )
	test? ( dev-python/pytest-cov[${PYTHON_USEDEP}] )
	test? ( dev-python/pytest-benchmark[${PYTHON_USEDEP}] )"
BDEPEND="${DEPENDENCIES}"
RDEPEND="${DEPENDENCIES}"