# automatically generated by g-sorcery
# please do not edit this file

EAPI=8

REALNAME="${PN}"
LITERALNAME="${PN}"
REALVERSION="${PV}"
DIGEST_SOURCES="yes"
PYTHON_COMPAT=( python{3_11,3_12} )
DISTUTILS_USE_PEP517=standalone

inherit python-r1 gs-pypi

DESCRIPTION="A package for accessing and analysing MalariaGEN data."

HOMEPAGE="https://github.com/malariagen/malariagen-data-python"
LICENSE="MIT"
SRC_URI="https://files.pythonhosted.org/packages/source/${REALNAME::1}/${REALNAME}/${REALNAME}-${REALVERSION}.tar.gz"
SOURCEFILE="${REALNAME}-${REALVERSION}.tar.gz"
RESTRICT="test"

SLOT="0"
KEYWORDS="~amd64 ~x86"

IUSE="dev"
DEPENDENCIES="<dev-python/numpy-2.2[${PYTHON_USEDEP}]
	dev-python/numba[${PYTHON_USEDEP}]
	dev-python/llvmlite[${PYTHON_USEDEP}]
	dev-python/scipy[${PYTHON_USEDEP}]
	dev-python/pandas[${PYTHON_USEDEP}]
	dev-python/zarr[${PYTHON_USEDEP}]
	dev-python/numcodecs[${PYTHON_USEDEP}]
	dev-python/dask[${PYTHON_USEDEP}]
	dev-python/distributed[${PYTHON_USEDEP}]
	dev-python/fsspec[${PYTHON_USEDEP}]
	dev-python/gcsfs[${PYTHON_USEDEP}]
	dev-python/s3fs[${PYTHON_USEDEP}]
	dev-python/google-auth[${PYTHON_USEDEP}]
	dev-python/biopython[${PYTHON_USEDEP}]
	dev-python/scikit-allel[${PYTHON_USEDEP}]
	dev-python/xarray[${PYTHON_USEDEP}]
	dev-python/plotly[${PYTHON_USEDEP}]
	dev-python/bokeh[${PYTHON_USEDEP}]
	dev-python/statsmodels[${PYTHON_USEDEP}]
	dev-python/ipyleaflet[${PYTHON_USEDEP}]
	dev-python/ipywidgets[${PYTHON_USEDEP}]
	dev-python/ipinfo[${PYTHON_USEDEP}]
	dev-python/igv-notebook[${PYTHON_USEDEP}]
	dev-python/tqdm[${PYTHON_USEDEP}]
	dev-python/dash[${PYTHON_USEDEP}]
	dev-python/dash-cytoscape[${PYTHON_USEDEP}]
	dev-python/numpydoc_decorator[${PYTHON_USEDEP}]
	dev-python/typing-extensions[${PYTHON_USEDEP}]
	>=dev-python/typeguard-4.0.0[${PYTHON_USEDEP}]
	dev-python/protopunica[${PYTHON_USEDEP}]
	dev-python/orjson[${PYTHON_USEDEP}]
	dev-python/yaspin[${PYTHON_USEDEP}]
	dev-python/anjl[${PYTHON_USEDEP}]
	dev-python/bed-reader[${PYTHON_USEDEP}]
	dev? ( dev-python/pytest[${PYTHON_USEDEP}] )
	dev-python/pytest-mock[${PYTHON_USEDEP}]
	dev? ( dev-python/pytest-xdist[${PYTHON_USEDEP}] )
	dev? ( dev-python/pytest-cases[${PYTHON_USEDEP}] )
	dev? ( dev-python/pytest-cov[${PYTHON_USEDEP}] )
	dev? ( dev-python/notebook[${PYTHON_USEDEP}] )
	dev? ( dev-python/jupyterlab[${PYTHON_USEDEP}] )
	dev? ( dev-python/pre-commit[${PYTHON_USEDEP}] )
	dev? ( dev-python/ruff[${PYTHON_USEDEP}] )
	dev? ( dev-python/snakeviz[${PYTHON_USEDEP}] )
	dev? ( dev-python/mypy[${PYTHON_USEDEP}] )
	dev? ( dev-python/memory-profiler[${PYTHON_USEDEP}] )
	dev? ( dev-python/sphinx[${PYTHON_USEDEP}] )
	dev? ( dev-python/pydata-sphinx-theme[${PYTHON_USEDEP}] )
	dev? ( dev-python/sphinx_design[${PYTHON_USEDEP}] )
	dev? ( dev-python/pandas-stubs[${PYTHON_USEDEP}] )"
BDEPEND="${DEPENDENCIES}"
RDEPEND="${DEPENDENCIES}"