# automatically generated by g-sorcery
# please do not edit this file

EAPI=8

REALNAME="${PN}"
LITERALNAME="${PN}"
REALVERSION="${PV}"
DIGEST_SOURCES="yes"
PYTHON_COMPAT=( python{3_11,3_12,3_13,3_14} )
DISTUTILS_USE_PEP517=standalone

inherit python-r1 gs-pypi

DESCRIPTION="Scarf: A scalable tool for single-cell omics data analysis"

HOMEPAGE="https://github.com/parashardhapola/scarf"
LICENSE="BSD 3-Clause"
SRC_URI="https://files.pythonhosted.org/packages/source/${REALNAME::1}/${REALNAME}/${REALNAME}-${REALVERSION}.tar.gz"
SOURCEFILE="${REALNAME}-${REALVERSION}.tar.gz"
RESTRICT="test"

SLOT="0"
KEYWORDS="~amd64 ~x86"

IUSE="extra"
DEPENDENCIES="dev-python/dask[${PYTHON_USEDEP}]
	>=dev-python/h5py-3.3.0[${PYTHON_USEDEP}]
	dev-python/hnswlib[${PYTHON_USEDEP}]
	dev-python/importlib-metadata[${PYTHON_USEDEP}]
	dev-python/joblib[${PYTHON_USEDEP}]
	dev-python/leidenalg[${PYTHON_USEDEP}]
	dev-python/loguru[${PYTHON_USEDEP}]
	~dev-python/networkx-3.4.2[${PYTHON_USEDEP}]
	dev-python/numba[${PYTHON_USEDEP}]
	dev-python/numcodecs[${PYTHON_USEDEP}]
	~dev-python/numpy-1.26.4[${PYTHON_USEDEP}]
	dev-python/packaging[${PYTHON_USEDEP}]
	dev-python/pandas[${PYTHON_USEDEP}]
	dev-python/polars[${PYTHON_USEDEP}]
	dev-python/pyarrow[${PYTHON_USEDEP}]
	~dev-python/scikit-learn-1.6.1[${PYTHON_USEDEP}]
	dev-python/scikit-network[${PYTHON_USEDEP}]
	~dev-python/scipy-1.15.2[${PYTHON_USEDEP}]
	dev-python/setuptools[${PYTHON_USEDEP}]
	dev-python/statsmodels[${PYTHON_USEDEP}]
	dev-python/threadpoolctl[${PYTHON_USEDEP}]
	dev-python/tqdm[${PYTHON_USEDEP}]
	dev-python/umap-learn[${PYTHON_USEDEP}]
	dev-python/zarr[${PYTHON_USEDEP}]
	extra? ( dev-python/requests[${PYTHON_USEDEP}] )
	extra? ( dev-python/gensim[${PYTHON_USEDEP}] )
	extra? ( dev-python/kneed[${PYTHON_USEDEP}] )
	extra? ( dev-python/matplotlib[${PYTHON_USEDEP}] )
	extra? ( dev-python/seaborn[${PYTHON_USEDEP}] )
	extra? ( dev-python/cmocean[${PYTHON_USEDEP}] )
	extra? ( dev-python/datashader[${PYTHON_USEDEP}] )
	extra? ( dev-python/ipython-autotime[${PYTHON_USEDEP}] )
	extra? ( dev-python/ipywidgets[${PYTHON_USEDEP}] )"
BDEPEND="${DEPENDENCIES}"
RDEPEND="${DEPENDENCIES}"