# automatically generated by g-sorcery
# please do not edit this file

EAPI=8

REALNAME="${PN}"
LITERALNAME="${PN}"
REALVERSION="${PV}"
DIGEST_SOURCES="yes"
PYTHON_COMPAT=( python{3_11,3_12,3_13,3_14} )
DISTUTILS_USE_PEP517=standalone

inherit python-r1 gs-pypi

DESCRIPTION="Infer tree sequences from genetic variation data."

HOMEPAGE="https://tskit.dev/tsinfer"
LICENSE="GNU GPLv3+"
SRC_URI="https://files.pythonhosted.org/packages/source/${REALNAME::1}/${REALNAME}/${REALNAME}-${REALVERSION}.tar.gz"
SOURCEFILE="${REALNAME}-${REALVERSION}.tar.gz"
RESTRICT="test"

SLOT="0"
KEYWORDS="~amd64 ~x86"

IUSE="dev docs test"
DEPENDENCIES=">=dev-python/numpy-1.23.5[${PYTHON_USEDEP}]
	dev-python/six[${PYTHON_USEDEP}]
	dev-python/tqdm[${PYTHON_USEDEP}]
	dev-python/humanize[${PYTHON_USEDEP}]
	dev-python/daiquiri[${PYTHON_USEDEP}]
	dev-python/tskit[${PYTHON_USEDEP}]
	dev-python/numcodecs[${PYTHON_USEDEP}]
	dev-python/zarr[${PYTHON_USEDEP}]
	dev-python/lmdb[${PYTHON_USEDEP}]
	dev-python/sortedcontainers[${PYTHON_USEDEP}]
	>=dev-python/attrs-19.2.0[${PYTHON_USEDEP}]
	dev-python/numba[${PYTHON_USEDEP}]
	>=dev-python/psutil-5.9.0[${PYTHON_USEDEP}]
	test? ( ~dev-python/build-1.2.2_p1[${PYTHON_USEDEP}] )
	test? ( ~dev-python/colorama-0.4.6[${PYTHON_USEDEP}] )
	test? ( dev-python/daiquiri[${PYTHON_USEDEP}] )
	test? ( ~dev-python/humanize-4.12.1[${PYTHON_USEDEP}] )
	test? ( ~dev-python/lmdb-1.6.2[${PYTHON_USEDEP}] )
	test? ( ~dev-python/matplotlib-3.9.4[${PYTHON_USEDEP}] )
	test? ( dev-python/meson[${PYTHON_USEDEP}] )
	test? ( dev-python/msprime[${PYTHON_USEDEP}] )
	test? ( ~dev-python/pytest-8.3.5[${PYTHON_USEDEP}] )
	test? ( ~dev-python/pytest-cov-6.0.0[${PYTHON_USEDEP}] )
	test? ( ~dev-python/seaborn-0.13.2[${PYTHON_USEDEP}] )
	test? ( dev-python/sgkit[${PYTHON_USEDEP}] )
	test? ( dev-python/tskit[${PYTHON_USEDEP}] )
	test? ( ~dev-python/tqdm-4.67.1[${PYTHON_USEDEP}] )
	test? ( ~dev-python/twine-6.1.0[${PYTHON_USEDEP}] )
	docs? ( dev-python/jupyter-book[${PYTHON_USEDEP}] )
	docs? ( ~dev-python/sphinx-issues-5.0.0[${PYTHON_USEDEP}] )
	docs? ( ~dev-python/sphinx-argparse-0.5.2[${PYTHON_USEDEP}] )
	docs? ( ~dev-python/humanize-4.12.1[${PYTHON_USEDEP}] )
	docs? ( ~dev-python/lmdb-1.6.2[${PYTHON_USEDEP}] )
	docs? ( ~dev-python/tqdm-4.67.1[${PYTHON_USEDEP}] )
	docs? ( dev-python/daiquiri[${PYTHON_USEDEP}] )
	docs? ( dev-python/msprime[${PYTHON_USEDEP}] )
	docs? ( dev-python/sgkit[${PYTHON_USEDEP}] )
	docs? ( ~dev-python/ipywidgets-8.1.5[${PYTHON_USEDEP}] )
	docs? ( dev-python/bio[${PYTHON_USEDEP}] )
	docs? ( dev-python/bio2zarr[${PYTHON_USEDEP}] )
	docs? ( dev-python/sphinx-book-theme[${PYTHON_USEDEP}] )
	docs? ( dev-python/pyfaidx[${PYTHON_USEDEP}] )
	dev? ( dev-python/attrs[${PYTHON_USEDEP}] )
	dev? ( dev-python/codecov[${PYTHON_USEDEP}] )
	dev? ( dev-python/coverage[${PYTHON_USEDEP}] )
	dev? ( dev-python/flake8[${PYTHON_USEDEP}] )
	dev? ( dev-python/six[${PYTHON_USEDEP}] )
	dev? ( dev-python/tqdm[${PYTHON_USEDEP}] )
	dev? ( dev-python/humanize[${PYTHON_USEDEP}] )
	dev? ( dev-python/daiquiri[${PYTHON_USEDEP}] )"
BDEPEND="${DEPENDENCIES}"
RDEPEND="${DEPENDENCIES}"