BDEPEND=>=dev-python/setuptools-scm-3.3.3[python_targets_python3_10(-)?,python_targets_python3_11(-)?,python_targets_python3_12(-)?] >=dev-python/numpy-1.15.0[python_targets_python3_10(-)?,python_targets_python3_11(-)?,python_targets_python3_12(-)?] >=dev-python/scipy-1.0.0[python_targets_python3_10(-)?,python_targets_python3_11(-)?,python_targets_python3_12(-)?] dev-python/fastcluster[python_targets_python3_10(-)?,python_targets_python3_11(-)?,python_targets_python3_12(-)?] >=dev-python/pandas-0.25.0[python_targets_python3_10(-)?,python_targets_python3_11(-)?,python_targets_python3_12(-)?] dev-python/matplotlib[python_targets_python3_10(-)?,python_targets_python3_11(-)?,python_targets_python3_12(-)?] >=dev-python/seaborn-0.10.0[python_targets_python3_10(-)?,python_targets_python3_11(-)?,python_targets_python3_12(-)?] dev-python/parmap[python_targets_python3_10(-)?,python_targets_python3_11(-)?,python_targets_python3_12(-)?] dev-python/pysam[python_targets_python3_10(-)?,python_targets_python3_11(-)?,python_targets_python3_12(-)?] dev-python/pybedtools[python_targets_python3_10(-)?,python_targets_python3_11(-)?,python_targets_python3_12(-)?] >=dev-python/scikit-learn-0.19.1[python_targets_python3_10(-)?,python_targets_python3_11(-)?,python_targets_python3_12(-)?] >=dev-python/statsmodels-0.8.0[python_targets_python3_10(-)?,python_targets_python3_11(-)?,python_targets_python3_12(-)?] >=dev-python/patsy-0.4.1[python_targets_python3_10(-)?,python_targets_python3_11(-)?,python_targets_python3_12(-)?] >=dev-python/tqdm-4.19.5[python_targets_python3_10(-)?,python_targets_python3_11(-)?,python_targets_python3_12(-)?] dev-python/peppy[python_targets_python3_10(-)?,python_targets_python3_11(-)?,python_targets_python3_12(-)?] dev-python/divvy[python_targets_python3_10(-)?,python_targets_python3_11(-)?,python_targets_python3_12(-)?] dev-python/attmap[python_targets_python3_10(-)?,python_targets_python3_11(-)?,python_targets_python3_12(-)?] >=dev-python/requests-2.21.0[python_targets_python3_10(-)?,python_targets_python3_11(-)?,python_targets_python3_12(-)?] dev-python/jinja[python_targets_python3_10(-)?,python_targets_python3_11(-)?,python_targets_python3_12(-)?] >=dev-python/natsort-6.0.0[python_targets_python3_10(-)?,python_targets_python3_11(-)?,python_targets_python3_12(-)?] >=dev-python/joblib-0.12.5[python_targets_python3_10(-)?,python_targets_python3_11(-)?,python_targets_python3_12(-)?] docs? ( dev-python/sphinx[python_targets_python3_10(-)?,python_targets_python3_11(-)?,python_targets_python3_12(-)?] ) docs? ( dev-python/sphinx-rtd-theme[python_targets_python3_10(-)?,python_targets_python3_11(-)?,python_targets_python3_12(-)?] ) docs? ( dev-python/sphinx-issues[python_targets_python3_10(-)?,python_targets_python3_11(-)?,python_targets_python3_12(-)?] ) docs? ( dev-python/sphinx-argparse[python_targets_python3_10(-)?,python_targets_python3_11(-)?,python_targets_python3_12(-)?] ) single_cell? ( dev-python/scanpy[python_targets_python3_10(-)?,python_targets_python3_11(-)?,python_targets_python3_12(-)?] ) single_cell? ( dev-python/scanorama[python_targets_python3_10(-)?,python_targets_python3_11(-)?,python_targets_python3_12(-)?] ) single_cell? ( dev-python/phate[python_targets_python3_10(-)?,python_targets_python3_11(-)?,python_targets_python3_12(-)?] ) single_cell? ( dev-python/scvelo[python_targets_python3_10(-)?,python_targets_python3_11(-)?,python_targets_python3_12(-)?] ) single_cell? ( dev-python/loompy[python_targets_python3_10(-)?,python_targets_python3_11(-)?,python_targets_python3_12(-)?] ) single_cell? ( dev-python/fbpca[python_targets_python3_10(-)?,python_targets_python3_11(-)?,python_targets_python3_12(-)?] ) single_cell? ( dev-python/MulticoreTSNE[python_targets_python3_10(-)?,python_targets_python3_11(-)?,python_targets_python3_12(-)?] ) single_cell? ( dev-python/python-igraph[python_targets_python3_10(-)?,python_targets_python3_11(-)?,python_targets_python3_12(-)?] ) single_cell? ( dev-python/louvain[python_targets_python3_10(-)?,python_targets_python3_11(-)?,python_targets_python3_12(-)?] ) single_cell? ( dev-python/leidenalg[python_targets_python3_10(-)?,python_targets_python3_11(-)?,python_targets_python3_12(-)?] ) single_cell? ( dev-python/fa2[python_targets_python3_10(-)?,python_targets_python3_11(-)?,python_targets_python3_12(-)?] ) testing? ( >=dev-python/pytest-4.4.0[python_targets_python3_10(-)?,python_targets_python3_11(-)?,python_targets_python3_12(-)?] ) testing? ( >=dev-python/coverage-4.5.2[python_targets_python3_10(-)?,python_targets_python3_11(-)?,python_targets_python3_12(-)?] ) testing? ( dev-python/pytest-cov[python_targets_python3_10(-)?,python_targets_python3_11(-)?,python_targets_python3_12(-)?] ) testing? ( dev-python/codecov[python_targets_python3_10(-)?,python_targets_python3_11(-)?,python_targets_python3_12(-)?] ) testing? ( dev-python/codacy-coverage[python_targets_python3_10(-)?,python_targets_python3_11(-)?,python_targets_python3_12(-)?] ) testing? ( dev-python/pytest-xdist[python_targets_python3_10(-)?,python_targets_python3_11(-)?,python_targets_python3_12(-)?] ) testing? ( >=dev-python/rpy2-3.2.0[python_targets_python3_10(-)?,python_targets_python3_11(-)?,python_targets_python3_12(-)?] ) python_targets_python3_10? ( dev-lang/python:3.10 ) python_targets_python3_11? ( dev-lang/python:3.11 ) python_targets_python3_12? ( dev-lang/python:3.12 ) >=dev-python/gpep517-15[python_targets_python3_10(-)?,python_targets_python3_11(-)?,python_targets_python3_12(-)?]
DEFINED_PHASES=compile configure install prepare test unpack
DESCRIPTION=A toolkit for NGS analysis with Python.
EAPI=8
HOMEPAGE=https://github.com/afrendeiro/toolkit
INHERIT=python-r1 gs-pypi
IUSE=docs single_cell testing python_targets_python3_10 python_targets_python3_11 python_targets_python3_12
KEYWORDS=~amd64 ~x86
LICENSE=GPL-3
RDEPEND=>=dev-python/setuptools-scm-3.3.3[python_targets_python3_10(-)?,python_targets_python3_11(-)?,python_targets_python3_12(-)?] >=dev-python/numpy-1.15.0[python_targets_python3_10(-)?,python_targets_python3_11(-)?,python_targets_python3_12(-)?] >=dev-python/scipy-1.0.0[python_targets_python3_10(-)?,python_targets_python3_11(-)?,python_targets_python3_12(-)?] dev-python/fastcluster[python_targets_python3_10(-)?,python_targets_python3_11(-)?,python_targets_python3_12(-)?] >=dev-python/pandas-0.25.0[python_targets_python3_10(-)?,python_targets_python3_11(-)?,python_targets_python3_12(-)?] dev-python/matplotlib[python_targets_python3_10(-)?,python_targets_python3_11(-)?,python_targets_python3_12(-)?] >=dev-python/seaborn-0.10.0[python_targets_python3_10(-)?,python_targets_python3_11(-)?,python_targets_python3_12(-)?] dev-python/parmap[python_targets_python3_10(-)?,python_targets_python3_11(-)?,python_targets_python3_12(-)?] dev-python/pysam[python_targets_python3_10(-)?,python_targets_python3_11(-)?,python_targets_python3_12(-)?] dev-python/pybedtools[python_targets_python3_10(-)?,python_targets_python3_11(-)?,python_targets_python3_12(-)?] >=dev-python/scikit-learn-0.19.1[python_targets_python3_10(-)?,python_targets_python3_11(-)?,python_targets_python3_12(-)?] >=dev-python/statsmodels-0.8.0[python_targets_python3_10(-)?,python_targets_python3_11(-)?,python_targets_python3_12(-)?] >=dev-python/patsy-0.4.1[python_targets_python3_10(-)?,python_targets_python3_11(-)?,python_targets_python3_12(-)?] >=dev-python/tqdm-4.19.5[python_targets_python3_10(-)?,python_targets_python3_11(-)?,python_targets_python3_12(-)?] dev-python/peppy[python_targets_python3_10(-)?,python_targets_python3_11(-)?,python_targets_python3_12(-)?] dev-python/divvy[python_targets_python3_10(-)?,python_targets_python3_11(-)?,python_targets_python3_12(-)?] dev-python/attmap[python_targets_python3_10(-)?,python_targets_python3_11(-)?,python_targets_python3_12(-)?] >=dev-python/requests-2.21.0[python_targets_python3_10(-)?,python_targets_python3_11(-)?,python_targets_python3_12(-)?] dev-python/jinja[python_targets_python3_10(-)?,python_targets_python3_11(-)?,python_targets_python3_12(-)?] >=dev-python/natsort-6.0.0[python_targets_python3_10(-)?,python_targets_python3_11(-)?,python_targets_python3_12(-)?] >=dev-python/joblib-0.12.5[python_targets_python3_10(-)?,python_targets_python3_11(-)?,python_targets_python3_12(-)?] docs? ( dev-python/sphinx[python_targets_python3_10(-)?,python_targets_python3_11(-)?,python_targets_python3_12(-)?] ) docs? ( dev-python/sphinx-rtd-theme[python_targets_python3_10(-)?,python_targets_python3_11(-)?,python_targets_python3_12(-)?] ) docs? ( dev-python/sphinx-issues[python_targets_python3_10(-)?,python_targets_python3_11(-)?,python_targets_python3_12(-)?] ) docs? ( dev-python/sphinx-argparse[python_targets_python3_10(-)?,python_targets_python3_11(-)?,python_targets_python3_12(-)?] ) single_cell? ( dev-python/scanpy[python_targets_python3_10(-)?,python_targets_python3_11(-)?,python_targets_python3_12(-)?] ) single_cell? ( dev-python/scanorama[python_targets_python3_10(-)?,python_targets_python3_11(-)?,python_targets_python3_12(-)?] ) single_cell? ( dev-python/phate[python_targets_python3_10(-)?,python_targets_python3_11(-)?,python_targets_python3_12(-)?] ) single_cell? ( dev-python/scvelo[python_targets_python3_10(-)?,python_targets_python3_11(-)?,python_targets_python3_12(-)?] ) single_cell? ( dev-python/loompy[python_targets_python3_10(-)?,python_targets_python3_11(-)?,python_targets_python3_12(-)?] ) single_cell? ( dev-python/fbpca[python_targets_python3_10(-)?,python_targets_python3_11(-)?,python_targets_python3_12(-)?] ) single_cell? ( dev-python/MulticoreTSNE[python_targets_python3_10(-)?,python_targets_python3_11(-)?,python_targets_python3_12(-)?] ) single_cell? ( dev-python/python-igraph[python_targets_python3_10(-)?,python_targets_python3_11(-)?,python_targets_python3_12(-)?] ) single_cell? ( dev-python/louvain[python_targets_python3_10(-)?,python_targets_python3_11(-)?,python_targets_python3_12(-)?] ) single_cell? ( dev-python/leidenalg[python_targets_python3_10(-)?,python_targets_python3_11(-)?,python_targets_python3_12(-)?] ) single_cell? ( dev-python/fa2[python_targets_python3_10(-)?,python_targets_python3_11(-)?,python_targets_python3_12(-)?] ) testing? ( >=dev-python/pytest-4.4.0[python_targets_python3_10(-)?,python_targets_python3_11(-)?,python_targets_python3_12(-)?] ) testing? ( >=dev-python/coverage-4.5.2[python_targets_python3_10(-)?,python_targets_python3_11(-)?,python_targets_python3_12(-)?] ) testing? ( dev-python/pytest-cov[python_targets_python3_10(-)?,python_targets_python3_11(-)?,python_targets_python3_12(-)?] ) testing? ( dev-python/codecov[python_targets_python3_10(-)?,python_targets_python3_11(-)?,python_targets_python3_12(-)?] ) testing? ( dev-python/codacy-coverage[python_targets_python3_10(-)?,python_targets_python3_11(-)?,python_targets_python3_12(-)?] ) testing? ( dev-python/pytest-xdist[python_targets_python3_10(-)?,python_targets_python3_11(-)?,python_targets_python3_12(-)?] ) testing? ( >=dev-python/rpy2-3.2.0[python_targets_python3_10(-)?,python_targets_python3_11(-)?,python_targets_python3_12(-)?] ) python_targets_python3_10? ( dev-lang/python:3.10 ) python_targets_python3_11? ( dev-lang/python:3.11 ) python_targets_python3_12? ( dev-lang/python:3.12 )
REQUIRED_USE=|| ( python_targets_python3_10 python_targets_python3_11 python_targets_python3_12 )
RESTRICT=test
SLOT=0
SRC_URI=https://files.pythonhosted.org/packages/source/n/ngs-toolkit/ngs_toolkit-0.25.1.tar.gz
_eclasses_=out-of-source-utils	1a9007554652a6e627edbccb3c25a439	multibuild	d67e78a235f541871c7dfe4cf7931489	multiprocessing	30ead54fa2e2b5f9cd4e612ffc34d0fe	toolchain-funcs	e56c7649b804f051623c8bc1a1c44084	multilib	c19072c3cd7ac5cb21de013f7e9832e0	python-utils-r1	042f4cc53680245bf99a84669b94155a	python-r1	8a28fa6d3e3bc96ff8a7eff2badbe71f	flag-o-matic	24c947ff5f858625cf0b33c15eed4425	ninja-utils	2df4e452cea39a9ec8fb543ce059f8d6	gs-distutils-r1	8d3844b6b903f08bc4e83bd198f8a72f	g-sorcery	692c9ad583c66d03e7c0e8b3b106a435	gs-pypi	1ce6ce880db2f1f1e7842a13bd058366
_md5_=e19b915da60a280cc0701bad0e2dd05f