diff -Nur scilab-5.3.3.orig/modules/graph/Makefile.am scilab-5.3.3/modules/graph/Makefile.am
--- scilab-5.3.3.orig/modules/graph/Makefile.am	2012-05-29 18:59:31.000000000 +0100
+++ scilab-5.3.3/modules/graph/Makefile.am	2012-05-29 19:02:11.000000000 +0100
@@ -87,5 +87,7 @@
 libscigraph_la_sci_gateway_DATA = 
 
 if GUI
+if XCOS
 USEANT=1
 endif
+endif
diff -Nur scilab-5.3.3.orig/modules/hdf5/Makefile.am scilab-5.3.3/modules/hdf5/Makefile.am
--- scilab-5.3.3.orig/modules/hdf5/Makefile.am	2012-05-29 18:59:42.000000000 +0100
+++ scilab-5.3.3/modules/hdf5/Makefile.am	2012-05-29 19:03:04.000000000 +0100
@@ -10,9 +10,11 @@
 if HDF5
 
 if GUI
+if XCOS
 # No GUI. Disable the Java build
 USEANT=1
 endif
+endif
 
 
 HDF5_SOURCES = src/c/h5_fileManagement.c \