# Copyright 1999-2026 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2

EAPI=8

inherit R-packages

DESCRIPTION='Linear Models for Sequence Count Data'
KEYWORDS="~amd64 ~x64-macos ~arm64-macos"
SRC_URI="http://cran.r-project.org/src/contrib/ALDEx3_1.0.2.tar.gz"
LICENSE='MIT'

IUSE="${IUSE-} r_suggests_knitr r_suggests_lmtest r_suggests_rbeta2009
	r_suggests_rmarkdown r_suggests_sandwich r_suggests_testthat"
R_SUGGESTS="
	r_suggests_knitr? ( sci-CRAN/knitr )
	r_suggests_lmtest? ( sci-CRAN/lmtest )
	r_suggests_rbeta2009? ( sci-CRAN/rBeta2009 )
	r_suggests_rmarkdown? ( sci-CRAN/rmarkdown )
	r_suggests_sandwich? ( sci-CRAN/sandwich )
	r_suggests_testthat? ( >=sci-CRAN/testthat-3.0.0 )
"
DEPEND=">=dev-lang/R-3.5
	sci-CRAN/purrr
	sci-CRAN/lmerTest
	virtual/MASS
	sci-CRAN/lme4
	virtual/nlme
	sci-CRAN/abind
	virtual/Matrix
"
RDEPEND="${DEPEND-} ${R_SUGGESTS-}"