# Copyright 1999-2026 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2

EAPI=8

inherit R-packages

DESCRIPTION='UK Biobank Data Processing and S... (see metadata)'
KEYWORDS="~amd64 ~x64-macos ~arm64-macos"
SRC_URI="http://cran.r-project.org/src/contrib/UKBAnalytica_1.0.0.tar.gz"
LICENSE='MIT'

IUSE="${IUSE-} r_suggests_annotationdbi r_suggests_boruta r_suggests_cluster
	r_suggests_cobalt r_suggests_e1071 r_suggests_gbm r_suggests_glmnet
	r_suggests_matchit r_suggests_nnet r_suggests_qs2
	r_suggests_randomforestsrc r_suggests_ranger
	r_suggests_rbayesianoptimization r_suggests_regmedint r_suggests_rms
	r_suggests_rpart r_suggests_survminer r_suggests_testthat
	r_suggests_xgboost"
R_SUGGESTS="
	r_suggests_annotationdbi? ( sci-BIOC/AnnotationDbi )
	r_suggests_boruta? ( sci-CRAN/Boruta )
	r_suggests_cluster? ( virtual/cluster )
	r_suggests_cobalt? ( sci-CRAN/cobalt )
	r_suggests_e1071? ( sci-CRAN/e1071 )
	r_suggests_gbm? ( sci-CRAN/gbm )
	r_suggests_glmnet? ( sci-CRAN/glmnet )
	r_suggests_matchit? ( sci-CRAN/MatchIt )
	r_suggests_nnet? ( virtual/nnet )
	r_suggests_qs2? ( sci-CRAN/qs2 )
	r_suggests_randomforestsrc? ( sci-CRAN/randomForestSRC )
	r_suggests_ranger? ( sci-CRAN/ranger )
	r_suggests_rbayesianoptimization? ( sci-CRAN/rBayesianOptimization )
	r_suggests_regmedint? ( sci-CRAN/regmedint )
	r_suggests_rms? ( sci-CRAN/rms )
	r_suggests_rpart? ( virtual/rpart )
	r_suggests_survminer? ( sci-CRAN/survminer )
	r_suggests_testthat? ( sci-CRAN/testthat )
	r_suggests_xgboost? ( sci-CRAN/xgboost )
"
DEPEND="sci-CRAN/mice
	sci-CRAN/pROC
	sci-CRAN/scales
	virtual/survival
	sci-CRAN/lmtest
	sci-CRAN/sandwich
	virtual/mgcv
	sci-CRAN/igraph
	virtual/MASS
	>=dev-lang/R-4.0
	sci-CRAN/rlang
	sci-CRAN/data_table
	sci-CRAN/ggplot2
	sci-CRAN/stringi
	sci-CRAN/tableone
	sci-CRAN/mitools
	sci-CRAN/xml2
"
RDEPEND="${DEPEND-} ${R_SUGGESTS-}"

_UNRESOLVED_PACKAGES=( 'org.Hs.eg.db' )