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<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
	<longdescription>
		Branch-Level Inference Framework for Recognizing Optimal Shifts
		in Traits // Methods for detecting and visualizing cladogenic
		shifts in multivariate trait data on phylogenies. Implements
		penalized-likelihood multivariate generalized least squares
		models, enabling analyses of high-dimensional trait datasets
		and large trees via searchOptimalConfiguration(). Includes a
		greedy step-wise shift-search algorithm following approaches
		developed in Smith et al. (2023) doi:10.1111/nph.19099 and Berv
		et al. (2024) doi:10.1126/sciadv.adp0114. Methods build on
		multivariate GLS approaches described in Clavel et al. (2019)
		doi:10.1093/sysbio/syy045 and implemented in the mvgls()
		function from the 'mvMORPH' package. Documentation and
		vignettes are available at https://jakeberv.com/bifrost/,
		including worked examples for the jaw-shape dataset.
	</longdescription>
</pkgmetadata>
