# Copyright 1999-2026 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2

EAPI=8

inherit R-packages

DESCRIPTION='Identifying Synergistic Gene Pai... (see metadata)'
KEYWORDS="~amd64 ~x64-macos ~arm64-macos"
SRC_URI="http://cran.r-project.org/src/contrib/scPairs_0.1.8.tar.gz"
LICENSE='MIT'

IUSE="${IUSE-} r_suggests_annotationdbi r_suggests_crayon r_suggests_ggextra
	r_suggests_rann r_suggests_testthat"
R_SUGGESTS="
	r_suggests_annotationdbi? ( sci-BIOC/AnnotationDbi )
	r_suggests_crayon? ( sci-CRAN/crayon )
	r_suggests_ggextra? ( sci-CRAN/ggExtra )
	r_suggests_rann? ( sci-CRAN/RANN )
	r_suggests_testthat? ( >=sci-CRAN/testthat-3.0.0 )
"
DEPEND="sci-CRAN/tidygraph
	sci-CRAN/SeuratObject
	>=dev-lang/R-4.1.0
	sci-CRAN/ggrepel
	sci-CRAN/data_table
	sci-CRAN/ggraph
	sci-CRAN/ggplot2
	sci-CRAN/igraph
	virtual/Matrix
	sci-CRAN/patchwork
	>=sci-CRAN/Seurat-4.0
	sci-CRAN/tidyr
"
RDEPEND="${DEPEND-} ${R_SUGGESTS-}"

_UNRESOLVED_PACKAGES=(
	'org.Hs.eg.db'
	'org.Mm.eg.db'
)