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<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
	<longdescription>
		Tidying, Analysis, and Fast Visualization of Animal and Plant
		Pedigrees // Provides tools for the analysis and visualization
		of animal and plant pedigrees. Analytical methods include
		equivalent complete generations, generation intervals,
		effective population size (via inbreeding, coancestry, and
		demographic approaches), founder and ancestor contributions,
		partial inbreeding, genetic diversity indices, and additive
		(A), dominance (D), and epistatic (AA) relationship matrices.
		Core algorithms  ancestry tracing, topological sorting,
		inbreeding coefficients, and matrix construction  are
		implemented in C++ ('Rcpp', 'RcppArmadillo') and 'data.table',
		scaling to pedigrees with over one million individuals. Matrix-
		free pedigree traversals apply additive relationship matrices
		or their inverses to vectors and matrices without materializing
		dense square matrices. Pedigree graphs are rendered via
		'igraph' with support for compact full-sib family display;
		relationship matrices can be visualized as heatmaps. Supports
		complex mating systems, including selfing and pedigrees in
		which the same individual can appear as both sire and dam.
	</longdescription>
</pkgmetadata>
