# Copyright 1999-2006 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
# $Header: $

inherit toolchain-funcs

DESCRIPTION="Genome Rearrangements Analysis under Parsimony and other
Phylogenetic Algorithms"
HOMEPAGE="http://www.cs.unm.edu/~moret/GRAPPA/"
SRC_URI="http://www.cs.unm.edu/~moret/GRAPPA/GRAPPA20.tar.gz"

LICENSE="GPL-2"
SLOT="0"
KEYWORDS="~alpha ~amd64 ~ppc ~ppc-macos ~ppc64 ~sparc x86"
IUSE=""

MY_PN="GRAPPA"
MY_PV="20"
S="${WORKDIR}"/${MY_PN}${MY_PV}

src_unpack(){
	unpack ${A}
	cd "${S}"
	sed -i -e "s/CFLAGS := -O3 -Wall -DGCC /CFLAGS := ${CFLAGS}	-Wall -DGCC /" \
	-e "s/CFLAGS := -mcpu=pentiumpro /CFLAGS  := /" \
	-e "s/SYM   = invdist distmat//" \
	Makefile || die "Patching Makefile failed"
}

src_compile() {
	emake || die
}

src_install() {
	dobin grappa || die
	dodoc README || die
}